Reproducible Research
Reproducible Research Slides
- History and Importance https://melindahiggins2000.github.io/SNRS2018_ReproducibleResearch/module_01.html#1
V. Hertzberg Slides
- Reproducible Research Slides https://melindahiggins2000.github.io/N741_Lecture2_20180124/Reproducible%20Research%2020180124.html#/ - built using the Rpres format in RStudio
Homework 1
Homework 1 is now posted on Github at https://github.com/melindahiggins2000/N741_Homework01_RMarkdown. Feel free to “FORK” this repository to your Github account or click “Clone or Download” and download the ZIP file to your computer.
Hands-On
Not it is your turn to try everything out.
Github
- Login to your Github Account
- Fork this repository https://github.com/melindahiggins2000/N741exercise01
- Go to your Github Account
Connect with GIT
- Read sections in Happy Git and Github for the UserR - specifically Chapter 8 on Introducing Yourself to GIT http://happygitwithr.com/hello-git.html
- Run Git and type in the commands to introduce yourself (create your credentials on your computer)
On Local Computer
- Create a folder that you will use for all of the projects and assignments in this course (e.g.
C:/N741).
Run RStudio
- Go to Tools/Global options, click on GIT/SVN - make sure your computer “sees” the GIT executable - on my computer it is
C:/Program Files/Git/bin/git.exe - Create New Project, Using Version Control, GIT
- From the Github repository, copy the URL to the clipboard, and make sure you create the project as a subdirectory of the folder you created for this course (e.g.
C:/N741).
Make some changes and sync with Github
- Open the README.md file
- Make some changes - add a sentence or two
- Notice the changes in the GIT TAB top right
- We will follow 3 steps:
- Add/Stage
- Commit
- PUSH
- Try using the RStudio GIT TAB
- and we’ll run again using the Terminal Window (or the GIT application)
Copyright © Melinda Higgins, Ph.D.. All contents under (CC) BY-NC-SA license,
unless otherwise noted.